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java.lang.Objectde.unihalle.informatik.Alida.operator.ALDOperator
de.unihalle.informatik.MiToBo.core.operator.MTBOperator
de.unihalle.informatik.MiToBo.apps.singleCellTracking2D.CellSegmentationPostprocessing
@ALDAOperator(genericExecutionMode=SWING, level=STANDARD) public class CellSegmentationPostprocessing
operator for doing common postprocessing tasks on already segmented cell images
Nested Class Summary |
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Nested classes/interfaces inherited from class de.unihalle.informatik.Alida.operator.ALDOperator |
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de.unihalle.informatik.Alida.operator.ALDOperator.HidingMode |
Field Summary |
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Fields inherited from class de.unihalle.informatik.Alida.operator.ALDOperator |
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completeDAG, name, operatorExecutionEventlistenerList, portHashAccess, verbose, versionProvider |
Constructor Summary | |
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CellSegmentationPostprocessing()
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CellSegmentationPostprocessing(MTBImage inImg)
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Method Summary | |
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MTBImage |
getResultImage()
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void |
operate()
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void |
setBorderExclusion(boolean excludeBorderObjects)
should border touching objects be excluded |
void |
setFG_Value(double val)
set the intensity value of the remaining foreground regions |
void |
setMinimumObjectArea(int minArea)
set the minimum area (number of pixels) a region must have in order to be kept |
void |
setObjectsEightConnected(boolean eightconnected)
are regions to be considered 8-connected (4-connected otherwise) |
Methods inherited from class de.unihalle.informatik.MiToBo.core.operator.MTBOperator |
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readResolve |
Methods inherited from class de.unihalle.informatik.Alida.operator.ALDOperator |
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addOperatorExecutionProgressEventListener, fieldContained, fireOperatorExecutionProgressEvent, getALDPortHashAccessKey, getConstructionMode, getHidingMode, getInInoutNames, getInInoutNames, getInNames, getInOutNames, getMissingRequiredInputs, getName, getNumParameters, getOutInoutNames, getOutNames, getParameter, getParameterDescriptor, getParameterNames, getSupplementalNames, getVerbose, getVersion, handleOperatorExecutionProgressEvent, isConfigured, print, print, print, printInterface, printInterface, readHistory, reinitializeParameterDescriptors, removeOperatorExecutionProgressEventListener, runOp, runOp, runOp, setConstructionMode, setHidingMode, setName, setParameter, setVerbose, toStringVerbose, unconfiguredItems, validate, validateCustom, validateGeneric, writeHistory, writeHistory, writeHistory |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public CellSegmentationPostprocessing() throws de.unihalle.informatik.Alida.exceptions.ALDOperatorException
de.unihalle.informatik.Alida.exceptions.ALDOperatorException
public CellSegmentationPostprocessing(MTBImage inImg) throws de.unihalle.informatik.Alida.exceptions.ALDOperatorException
inImg
- input image
de.unihalle.informatik.Alida.exceptions.ALDOperatorException
Method Detail |
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public void operate() throws de.unihalle.informatik.Alida.exceptions.ALDOperatorException, de.unihalle.informatik.Alida.exceptions.ALDProcessingDAGException
operate
in class de.unihalle.informatik.Alida.operator.ALDOperator
de.unihalle.informatik.Alida.exceptions.ALDOperatorException
de.unihalle.informatik.Alida.exceptions.ALDProcessingDAGException
public void setBorderExclusion(boolean excludeBorderObjects)
excludeBorderObjects
- public void setMinimumObjectArea(int minArea)
minArea
- public void setObjectsEightConnected(boolean eightconnected)
eightconnected
- public void setFG_Value(double val)
val
- public MTBImage getResultImage()
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