|
||||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | |||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |
java.lang.Objectde.unihalle.informatik.Alida.operator.ALDOperator
de.unihalle.informatik.MiToBo.core.operator.MTBOperator
de.unihalle.informatik.MiToBo.apps.scratchAssay.ScratchAssayAnalyzer
@ALDAOperator(genericExecutionMode=ALL, level=APPLICATION, allowBatchMode=false) public class ScratchAssayAnalyzer
class for analyzing the scratch area in several scratch assay images
Nested Class Summary | |
---|---|
static class |
ScratchAssayAnalyzer.InputType
|
static class |
ScratchAssayAnalyzer.ScratchOrientation
|
Nested classes/interfaces inherited from class de.unihalle.informatik.Alida.operator.ALDOperator |
---|
de.unihalle.informatik.Alida.operator.ALDOperator.HidingMode |
Field Summary |
---|
Fields inherited from class de.unihalle.informatik.Alida.operator.ALDOperator |
---|
completeDAG, name, operatorExecutionEventlistenerList, portHashAccess, verbose, versionProvider |
Constructor Summary | |
---|---|
ScratchAssayAnalyzer()
|
|
ScratchAssayAnalyzer(String fileName,
int sigma,
int entropyFilterSize,
ScratchAssayAnalyzer.ScratchOrientation orientation,
boolean noCheck,
ScratchAssayAnalyzer.InputType inType,
int maxIter)
|
Method Summary | |
---|---|
void |
initializeWithPrevious(boolean initWithPrevious)
|
void |
isSilent(boolean silent)
should results be saved without user interaction |
void |
operate()
|
void |
setSVMFile(String path)
sets the path to a svm model file used for classification |
Methods inherited from class de.unihalle.informatik.MiToBo.core.operator.MTBOperator |
---|
readResolve |
Methods inherited from class de.unihalle.informatik.Alida.operator.ALDOperator |
---|
addOperatorExecutionProgressEventListener, fieldContained, fireOperatorExecutionProgressEvent, getALDPortHashAccessKey, getConstructionMode, getHidingMode, getInInoutNames, getInInoutNames, getInNames, getInOutNames, getMissingRequiredInputs, getName, getNumParameters, getOutInoutNames, getOutNames, getParameter, getParameterDescriptor, getParameterNames, getSupplementalNames, getVerbose, getVersion, handleOperatorExecutionProgressEvent, isConfigured, print, print, print, printInterface, printInterface, readHistory, reinitializeParameterDescriptors, removeOperatorExecutionProgressEventListener, runOp, runOp, runOp, setConstructionMode, setHidingMode, setName, setParameter, setVerbose, toStringVerbose, unconfiguredItems, validate, validateCustom, validateGeneric, writeHistory, writeHistory, writeHistory |
Methods inherited from class java.lang.Object |
---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
---|
public ScratchAssayAnalyzer() throws de.unihalle.informatik.Alida.exceptions.ALDOperatorException
de.unihalle.informatik.Alida.exceptions.ALDOperatorException
public ScratchAssayAnalyzer(String fileName, int sigma, int entropyFilterSize, ScratchAssayAnalyzer.ScratchOrientation orientation, boolean noCheck, ScratchAssayAnalyzer.InputType inType, int maxIter) throws de.unihalle.informatik.Alida.exceptions.ALDOperatorException
fileName
- name of the first scratch assay imagesigma
- standard deviation of gauss filterentropyFilterSize
- size of entropy filter maskorientation
- is scratch horizontally oriented (assumed to be vertically oriented else)noCheck
- should scratch present not be checkedinType
- which type of input data is providedmaxIter
- maximum number of iterations for level set segmentation
de.unihalle.informatik.Alida.exceptions.ALDOperatorException
Method Detail |
---|
public void operate() throws de.unihalle.informatik.Alida.exceptions.ALDOperatorException, de.unihalle.informatik.Alida.exceptions.ALDProcessingDAGException
operate
in class de.unihalle.informatik.Alida.operator.ALDOperator
de.unihalle.informatik.Alida.exceptions.ALDOperatorException
de.unihalle.informatik.Alida.exceptions.ALDProcessingDAGException
public void isSilent(boolean silent)
silent
- public void setSVMFile(String path)
path
- public void initializeWithPrevious(boolean initWithPrevious)
|
||||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | |||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |