Uses of Package
de.unihalle.informatik.MiToBo.core.datatypes

Packages that use de.unihalle.informatik.MiToBo.core.datatypes
de.unihalle.informatik.MiToBo.apps.cells2D   
de.unihalle.informatik.MiToBo.apps.cytoplasm2D   
de.unihalle.informatik.MiToBo.apps.datatypes.cellImages   
de.unihalle.informatik.MiToBo.apps.neurites2D   
de.unihalle.informatik.MiToBo.apps.nuclei2D   
de.unihalle.informatik.MiToBo.apps.particles2D   
de.unihalle.informatik.MiToBo.apps.singleCellTracking2D   
de.unihalle.informatik.MiToBo.core.datatypes Provides basic datatypes for MiToBo. 
de.unihalle.informatik.MiToBo.core.datatypes.neurites   
de.unihalle.informatik.MiToBo.core.imageJ Provides convenience classes for interaction with ImageJ system. 
de.unihalle.informatik.MiToBo.fields Provides classes for calculating gradient vector flow fields, image gradient fields, potential fields and other possible fields from different data sources. 
de.unihalle.informatik.MiToBo.io.dirs Provides classes for dealing with directories. 
de.unihalle.informatik.MiToBo.io.files Provides classes for handling (non-)image files. 
de.unihalle.informatik.MiToBo.morphology Provides classes for morphological processing of binary images. 
de.unihalle.informatik.MiToBo.segmentation.basics   
de.unihalle.informatik.MiToBo.segmentation.contours.extraction Provides classes for performing contour extractions from regions or other image elements. 
de.unihalle.informatik.MiToBo.segmentation.levelset.PDE.datatypes   
de.unihalle.informatik.MiToBo.segmentation.levelset.PDE.solver   
de.unihalle.informatik.MiToBo.segmentation.levelset.nonPDE   
de.unihalle.informatik.MiToBo.segmentation.regions.convert   
de.unihalle.informatik.MiToBo.segmentation.regions.labeling Provides classes to perform region labeling to find connected components in binarized images. 
de.unihalle.informatik.MiToBo.segmentation.regions.mser   
de.unihalle.informatik.MiToBo.segmentation.snakes.datatypes Provides basic datatypes for MiToBo explicit active contours (snakes). 
de.unihalle.informatik.MiToBo.segmentation.snakes.energies Provides classes with energies to be used with MiToBo snakes. 
de.unihalle.informatik.MiToBo.segmentation.snakes.optimize Provides classes for performing snake-based segmentation on images. 
de.unihalle.informatik.MiToBo.segmentation.thresholds Provides classes for thresholding grayscale and color images. 
de.unihalle.informatik.MiToBo.tracking.multitarget.algo   
de.unihalle.informatik.MiToBo.tracking.multitarget.datatools   
de.unihalle.informatik.MiToBo.visualization.drawing Provides operators to visualize data types. 
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.apps.cells2D
MTBPolygon2DSet
          Data type to represent a set of MTBPolygon2D.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.apps.cytoplasm2D
MTBPolygon2DSet
          Data type to represent a set of MTBPolygon2D.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.apps.datatypes.cellImages
MTBPolygon2DSet
          Data type to represent a set of MTBPolygon2D.
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.apps.neurites2D
MTBContour2DSet
          A set of 2D contours living in a common domain which is a rectangular subset of R x R.
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.apps.nuclei2D
MTBPolygon2DSet
          Data type to represent a set of MTBPolygon2D.
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.apps.particles2D
MTBImageHistogram
          Class for generating intensity histograms of objects from class MTBImage.
MTBRegion2D
          Class to implement a 2D region object. the region is stored in a vector of 2D double points with its x- and y-coordinate.
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
MTBRegion2DSetBag
          A datatype to store multiple MTBRegion2D sets
MTBTree
          This class implements a simple tree data structure.
MTBTreeNode
          This class implements the nodes of class 'Tree'.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.apps.singleCellTracking2D
MTBRegion2D
          Class to implement a 2D region object. the region is stored in a vector of 2D double points with its x- and y-coordinate.
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.core.datatypes
MTBBorder2D
          Datatype to represent borders of components.
MTBBorder2D.BorderConnectivity
          Kind of neighborhood to be applied to border pixels.
MTBBorder2DSet
          A set of 2D borders.
MTBContour2D
          Class to create 2D contour objects with a vector of points, belonging to the contour.
MTBContour2DSet
          A set of 2D contours living in a common domain which is a rectangular subset of R x R.
MTBGraph
          Class implements an (un-) directed MTBGraph.
MTBGraphEdge
          Class implements MTBGraphEdges for the MTBGraph.
MTBGraphNode
          Class implements MTBGraphNodes for the MTBGraph.
MTBImageHistogram
          Class for generating intensity histograms of objects from class MTBImage.
MTBLineSegment2D
          Enhanced 2D line segments.
MTBNeuriteSkelGraph
           The class implements a neurite skeleton graph (NSG), based on the skeleton of a neurite region.
MTBNeuriteSkelGraphException
          Exception handling for MTBSkeletonGraph.
MTBNeuriteSkelGraphNode
          Class implements a MTBSkeletonGraphNode, which is a type of the MTBGraphNode.
MTBNeuriteSkelGraphNode.MTBSkeletonNodeType
          Type of the MTBGraphNode
MTBPoint3D
          The Point3D class defines a point representing a location in (x, y, z) coordinate space.
MTBPolygon2D
          Polygon datatype with double precision.
MTBPolygon2DSet
          Data type to represent a set of MTBPolygon2D.
MTBRegion2D
          Class to implement a 2D region object. the region is stored in a vector of 2D double points with its x- and y-coordinate.
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
MTBRegion3D
          Class to create a 3D region object.
MTBRegionInterface
          Interface for regions in MiToBo to enable unified handling.
MTBRegionSetInterface
          Interface for region sets in MiToBo to enable unified handling.
MTBStructuringElement
          class representing a 2D flat (, i.e. without different gray values) structuring element
for the use with morphological operations
values are stored in a recatangular 2D array (rows: 1st dimension, columns: 2nd dimension)
whereas onValue represents set locations and 0 represents unset locations
MTBTreeNode
          This class implements the nodes of class 'Tree'.
MTBTreeNodeData
          Abstract class to define properties for data objects associated with TreeNodes.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.core.datatypes.neurites
MTBNeuriteSkelGraph
           The class implements a neurite skeleton graph (NSG), based on the skeleton of a neurite region.
MTBRegion2D
          Class to implement a 2D region object. the region is stored in a vector of 2D double points with its x- and y-coordinate.
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.core.imageJ
MTBBorder2DSet
          A set of 2D borders.
MTBContour2DSet
          A set of 2D contours living in a common domain which is a rectangular subset of R x R.
MTBPolygon2D
          Polygon datatype with double precision.
MTBPolygon2DSet
          Data type to represent a set of MTBPolygon2D.
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.fields
MTBVectorField2D
          Class to represent several kinds of vector fields.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.io.dirs
MTBTree
          This class implements a simple tree data structure.
MTBTreeNode
          This class implements the nodes of class 'Tree'.
MTBTreeNodeData
          Abstract class to define properties for data objects associated with TreeNodes.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.io.files
MTBGraph
          Class implements an (un-) directed MTBGraph.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.morphology
MTBStructuringElement
          class representing a 2D flat (, i.e. without different gray values) structuring element
for the use with morphological operations
values are stored in a recatangular 2D array (rows: 1st dimension, columns: 2nd dimension)
whereas onValue represents set locations and 0 represents unset locations
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.segmentation.basics
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.segmentation.contours.extraction
MTBBorder2D.BorderConnectivity
          Kind of neighborhood to be applied to border pixels.
MTBBorder2DSet
          A set of 2D borders.
MTBContour2D
          Class to create 2D contour objects with a vector of points, belonging to the contour.
MTBContour2DSet
          A set of 2D contours living in a common domain which is a rectangular subset of R x R.
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.segmentation.levelset.PDE.datatypes
MTBPoint3D
          The Point3D class defines a point representing a location in (x, y, z) coordinate space.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.segmentation.levelset.PDE.solver
MTBPolygon2DSet
          Data type to represent a set of MTBPolygon2D.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.segmentation.levelset.nonPDE
MTBRegion2D
          Class to implement a 2D region object. the region is stored in a vector of 2D double points with its x- and y-coordinate.
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.segmentation.regions.convert
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.segmentation.regions.labeling
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.segmentation.regions.mser
MTBRegionSetInterface
          Interface for region sets in MiToBo to enable unified handling.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.segmentation.snakes.datatypes
MTBContour2D
          Class to create 2D contour objects with a vector of points, belonging to the contour.
MTBPolygon2D
          Polygon datatype with double precision.
MTBPolygon2DSet
          Data type to represent a set of MTBPolygon2D.
MTBRegion2D
          Class to implement a 2D region object. the region is stored in a vector of 2D double points with its x- and y-coordinate.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.segmentation.snakes.energies
MTBVectorField2D
          Class to represent several kinds of vector fields.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.segmentation.snakes.optimize
MTBPolygon2DSet
          Data type to represent a set of MTBPolygon2D.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.segmentation.thresholds
MTBImageHistogram
          Class for generating intensity histograms of objects from class MTBImage.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.tracking.multitarget.algo
MTBGraph
          Class implements an (un-) directed MTBGraph.
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.tracking.multitarget.datatools
MTBRegion2DSetBag
          A datatype to store multiple MTBRegion2D sets
 

Classes in de.unihalle.informatik.MiToBo.core.datatypes used by de.unihalle.informatik.MiToBo.visualization.drawing
MTBGraph
          Class implements an (un-) directed MTBGraph.
MTBImageHistogram
          Class for generating intensity histograms of objects from class MTBImage.
MTBPolygon2DSet
          Data type to represent a set of MTBPolygon2D.
MTBRegion2D
          Class to implement a 2D region object. the region is stored in a vector of 2D double points with its x- and y-coordinate.
MTBRegion2DSet
          A set of 2D regions living in a common domain which is a rectangular subset of R x R.
MTBRegion2DSetBag
          A datatype to store multiple MTBRegion2D sets
 



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