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arcus cotangens
of value
in radian.
ActinAnalyzer2D
.ActinAnalyzer2D
.CheckBoxPanel.CHECK_CHANGED_PROPERTY
if a checkbox value was changed
RadioButtonPanel.SELECTION_CHANGED_PROPERTY
java.awt.Color
objects.java.awt.Color
objects.java.awt.Color
objects.Vector
.
coordinatesNeighborNeighbors
this array give
for each neighbor in the neighborhood coordinates of its neighbors
(i.e. neighborneighbors).
null
cotangens
of value
.
MTBImage.MTBImageType.MTB_BYTE
from
the given data array.
maxArea
in a hypothetical image of
a random size between 1
and maxArea
.
System.out
.
phi
supplied
from current phase to newPhase
.
phi
supplied as argument and assumed to be
associated with this energy object.
radius
+1.
phi
.
phi
. 2D only
phi
assumed to be associated with this energy object.
FeatureCalculator
.FeatureCalculator
.entries
array.
choices
array.
HashMap
to the panel.
getCurrentTime
) conditional on all observations up to that time.
getCurrentTime
) conditional on all observations up to that time.
contour
into the corresponding xml
element xmlContour
.
MTBContour2D
from the information of the
xmlContour
.
MTBImageByte
image after growing.
polygon
into the corresponding xml
element xmlPolygon
.
Polygon2D
from the information of the
xmlPolygon
.
i
-th sample at the time t
conditional on previous associations and all
observations up to time t
.
i
-th sample conditional on all observations,
normalized by all samples' probabilities.
snake
into the corresponding xml
element xmlSnake
.
targetID
up to current time, where targetID may be 0 to obtain the clutter observations (which do not form a
track).
nodeSrc
to nodeTgt
.
MTBImage
.
MTBGraph
ParticleDetectorUWT2D
given as input (with all parameters set)
over all slices of the input image for a given channel.JFileChooser
MTBImage
.JFileChooser
threshold
and upper threshold
(upperThreshold
.dist
defines the neighborhood, e.g.
true
if the hue channel is undefined which is true is
saturation is zero or undefined which in turn is encoded as zero.
true
if the hue channel is undefined which is true is
saturation is zero or undefined which in turn is encoded as zero.
true
if the saturation channel is undefined which is true
if the x channel is zero.
true
if the saturation channel is undefined which is true
if the x channel is zero.
drawSample()
.
StatusListener
objects.
Point2D.Double
.MTBBorder2DSet
in the ImageJ
ROI-Manager.MTBContour2DSet
in the ImageJ
ROI-Manager.phi
realizing the fitting term of the Chan-Vese energy.
phi
realizing the fitting term of the Chan-Vese energy to segment img
.
MTBRegion2DSetBag
MTBRegion2DSet
MTBRegion3DSet
MTBPolygon2DSet
MTBContour2DSet
MTBBorder2DSet
MTBPolygon2DSet
.energies
.
ImageArithmetics
class.MTBImage
.ALDBatchInputIteratorSwing
for MitoBo images.ALDDataIOSwing
interface for JFreeChart objects.phi
.
opName
and use executeOperator
to execute this operator if requested by the user.
MTBPolygon2D
.MTBPolygon2DSet
in the ImageJ
ROI-Manager.write
method of this class.
write
method of this class.
toXMLType
method of this class.
MTBRegion2DSet
in the ImageJ
ROI-Manager.write
method of this class.
ALDBatchInputIteratorSwing
for MitoBo images.ALDBatchInputIteratorSwing
for MitoBo images.ALDBatchInputIteratorSwing
for MitoBo images.ALDBatchInputIteratorSwing
for MTBTableModel
.FileFilter
for text
files where MiToBo table data is stored.coordinatesNeighborNeighbors
and gives for each neighborneighbor the offset instead of coordinates.
coordinatesNeighbors
this array hold the offsets of the neighbors.
MTBImage
with three channels, the same size as
the original one and converts each rgb pixel to a
hsx
pixel, where x stands for Inentsity or Brightness or Value
depending on the mode set.
drawSample()
.
true
null
.
numParticles
from density
.
imageIdx
imageIdx
using information from a Calibration
object
Point2D.Double
.
Point2D.Double
.
phi
assumed to be associated with this energy object.
WRITER_OPTIONS_APPROVED_PROPERTY
event of the ImageWriterOptionsPane
to assign the writer options when the file chooser closed by approving the file selection (and thereby writer options).
java.util.Random
objects.java.util.Random
objects.java.util.Random
objects.filename
and set the MTB
polygon set accordingly.
xmlContourSet
and set the MTB
polygon set accordingly.
filename
and set the MTB
polygon set accordingly.
xmlPolygon2DSet
and set the MTB
polygon set accordingly.
imageIdx
from the specified file and return it as ImagePlus object.
imageIdx
from the specified file and return it as MTBImage object.
MTBImageRGB
( RGB color space )
into an image with HSX( hue saturation intensity/brightness/value ) color
space.MTBSegmentationInterface
.SegmentationInitializer
.MTBGraph
nodeSrc
to nodeTgt
.
MTBImage
.
StatusListener
.
FeatureCalculator
.TileFeatureCalculator
.c
is one in the
neighborhood nbClassess3D
.
c
is one in the
pixel with coordinate (x,y,z)
in the segmentation object
segmentation
.
x
and
add noise sampled from the Gaussian noise distribution.
gaussian
with this transform.
vector
.
filename.xml
Additionally, its processing history is written.
filename.xml
Additionally the processing history is written.
filename
If flag is
set to true, the processing history is written, too.
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