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Packages that use MTBRegion2D | |
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de.unihalle.informatik.MiToBo.apps.particles2D | |
de.unihalle.informatik.MiToBo.apps.singleCellTracking2D | |
de.unihalle.informatik.MiToBo.core.datatypes | Provides basic datatypes for MiToBo. |
de.unihalle.informatik.MiToBo.core.datatypes.neurites | |
de.unihalle.informatik.MiToBo.segmentation.levelset.nonPDE | |
de.unihalle.informatik.MiToBo.segmentation.snakes.datatypes | Provides basic datatypes for MiToBo explicit active contours (snakes). |
de.unihalle.informatik.MiToBo.visualization.drawing | Provides operators to visualize data types. |
Uses of MTBRegion2D in de.unihalle.informatik.MiToBo.apps.particles2D |
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Methods in de.unihalle.informatik.MiToBo.apps.particles2D with parameters of type MTBRegion2D | |
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protected Integer |
ParticleDetectorUWT2D.getLabelMostInRegion(MTBRegion2D reg,
MTBImage img)
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protected Vector<Integer> |
ParticleDetectorUWT2D.getLabelsInRegion(MTBRegion2D reg,
MTBImage img)
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protected double |
ParticleDetectorUWT2D.logPofRegion(MTBRegion2D reg,
MTBImage img,
MTBImageHistogram cumHist)
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protected double |
ParticleDetectorUWT2D.meanOfRegion(MTBRegion2D reg,
MTBImage img)
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Method parameters in de.unihalle.informatik.MiToBo.apps.particles2D with type arguments of type MTBRegion2D | |
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protected MTBImage |
ParticleDetectorUWT2D.regionsToBinImage(MTBImage img,
MTBImage mask,
Vector<MTBRegion2D> regs)
Create binary image from a set of regions. |
Uses of MTBRegion2D in de.unihalle.informatik.MiToBo.apps.singleCellTracking2D |
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Methods in de.unihalle.informatik.MiToBo.apps.singleCellTracking2D that return MTBRegion2D | |
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static MTBRegion2D |
LabelAreasToRegions.getBackground(MTBImage frame,
int bgLabel)
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Uses of MTBRegion2D in de.unihalle.informatik.MiToBo.core.datatypes |
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Fields in de.unihalle.informatik.MiToBo.core.datatypes declared as MTBRegion2D | |
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protected MTBRegion2D |
MTBTreeNodeRegion2D.m_reg
2D region object. |
Fields in de.unihalle.informatik.MiToBo.core.datatypes with type parameters of type MTBRegion2D | |
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protected Vector<MTBRegion2D> |
MTBRegion2DSet.regionSet
The set of regions represented as a Vector. |
Methods in de.unihalle.informatik.MiToBo.core.datatypes that return MTBRegion2D | |
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MTBRegion2D |
MTBRegion2D.clone()
Override java.lang.Object.clone() to create and return a copy of this object. |
static MTBRegion2D |
MTBRegion2D.createRandomRegion2D(int xSize,
int ySize,
int maxArea,
Random rndGen)
Create a random connected 2D region of size maxArea in a hypothetical image of
a random size between 1 and maxArea . |
MTBRegion2D |
MTBRegion2DSet.elementAt(int i)
Get a region by index |
MTBRegion2D |
MTBRegion2DSet.get(int i)
Get a region by index |
MTBRegion2D |
MTBTreeNodeRegion2D.getRegion()
Return the 2D region. |
MTBRegion2D |
MTBRegion2D.getRegion()
Get a Region2D copy of this object. |
MTBRegion2D |
MTBContour2D.getRegion(int imageSizeX,
int imageSizeY)
Method to get the included region in a 2D contour as Region2D object. |
MTBRegion2D |
MTBRegion2D.join(MTBRegion2D reg)
Join a region with this region. |
Methods in de.unihalle.informatik.MiToBo.core.datatypes that return types with arguments of type MTBRegion2D | |
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Iterator<MTBRegion2D> |
MTBRegion2DSet.iterator()
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Methods in de.unihalle.informatik.MiToBo.core.datatypes with parameters of type MTBRegion2D | |
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boolean |
MTBRegion2DSet.add(MTBRegion2D region)
Append a region (at the end) to the set of regions. |
MTBRegion2D |
MTBRegion2D.join(MTBRegion2D reg)
Join a region with this region. |
void |
MTBRegion2DSet.remove(MTBRegion2D regionToRemove)
Delete the given region object from the set, if contained. |
void |
MTBRegion2DSet.setElementAt(MTBRegion2D region,
int i)
Set the i-th region from the set |
Constructors in de.unihalle.informatik.MiToBo.core.datatypes with parameters of type MTBRegion2D | |
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MTBTreeNodeRegion2D(MTBRegion2D reg)
Construct a new MTBTreeNodeRegion2D from the given 2D region object. |
Constructor parameters in de.unihalle.informatik.MiToBo.core.datatypes with type arguments of type MTBRegion2D | |
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MTBRegion2DSet(Vector<MTBRegion2D> regions,
double _xMin,
double _yMin,
double _xMax,
double _yMax)
Construct an empty set of regions with given extent of domain |
Uses of MTBRegion2D in de.unihalle.informatik.MiToBo.core.datatypes.neurites |
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Methods in de.unihalle.informatik.MiToBo.core.datatypes.neurites that return MTBRegion2D | |
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MTBRegion2D |
MTBNeurite2D.getNeuriteRegion()
Get neurite corresponding region. |
MTBRegion2D |
MTBNeurite2D.getNeuriteShaftRegion()
Get neurite shaft region (without growth cone). |
Constructors in de.unihalle.informatik.MiToBo.core.datatypes.neurites with parameters of type MTBRegion2D | |
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MTBNeurite2D(MTBNeuriteSkelGraph _neuriteGraph,
Vector<Vector<Point2D.Double>> _featurePoints,
Vector<Vector<Line2D.Double>> _featureLines,
MTBRegion2D _neuriteRegion,
int _maxSpineLength,
int[] _neuriteShaftLengths,
Vector<Vector<Double>> _neuriteWidths)
Constructor to generate a new neurite object. |
Uses of MTBRegion2D in de.unihalle.informatik.MiToBo.segmentation.levelset.nonPDE |
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Constructor parameters in de.unihalle.informatik.MiToBo.segmentation.levelset.nonPDE with type arguments of type MTBRegion2D | |
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MTBLevelsetMembership(int sizeX,
int sizeY,
Vector<MTBRegion2D> regions,
MTBImage invalidImg,
boolean multiphase)
Constructor for given size which is initialized from a list of 2D regions for a 2D level set function. |
Uses of MTBRegion2D in de.unihalle.informatik.MiToBo.segmentation.snakes.datatypes |
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Methods in de.unihalle.informatik.MiToBo.segmentation.snakes.datatypes with parameters of type MTBRegion2D | |
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static MTBSnake |
MTBSnake.convertRegionToSnake(MTBRegion2D region)
Converts a region into a snake. |
Uses of MTBRegion2D in de.unihalle.informatik.MiToBo.visualization.drawing |
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Methods in de.unihalle.informatik.MiToBo.visualization.drawing with parameters of type MTBRegion2D | |
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protected void |
DrawTracks2D.drawSpot(MTBImage img,
MTBRegion2D reg,
int t,
int c,
int color)
Draw region to an image at time=t and channel=c with specified color. |
protected void |
DrawTracks2D.drawSqare(MTBImage img,
MTBRegion2D reg,
int t,
int c,
int color,
int radius)
Draw square to an image at time=t and channel=c with specified color and size=2* radius +1. |
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